Noticed this starting a couple months ago. Running "Rebuilding: Launch Services database" in OnyX fixed it temporarily, but the problem came right back within hours. I definitely only have one instance of each of those apps in my Macintosh HD/Applications folder and I even used Find Any File to search my entire drive to be sure another instance wasn't hiding anywhere.
What gives? How do I permanently fix this issue (one I've never had in my 17 years of exclusively using Macs until now)?