I'm noticing the same.
Stupid question, but..... Is going into Disk Utility, wiping the drive and then reinstalling OS X from recovery the same thing as a clean install? (Downloading the installer, etc. making a bootable usb, etc. is such a chore.)
I notice right now after wiping and reinstalling, disk utility says I have 3.07 GB free space. I have nothing installed on the computer. I have a fusion drive with a total size of 3.12 GB.
On Yosemite and Mavericks, I would generally have 3.08 GB free space. That was after installing photoshop, auto cad, Sketchup, etc. Something seems off.