The problem lies with the lack of differences. Having only 1GB of RAM in a 5.5in device, pushing those extra pixels at a higher resolution, was enough to cause poorer performance. The phone never truly had enough horsepower in that department.
Yes, unfortunately, this is the answer. The 6+ was a bit of a mis-step, the iPad 3 of iPhones. Hopefully the optimization phase of 11.x will at least return to something like its initial performance.