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So what about this Internal/External Areca card. Would that be able to drive both the external RAID enclosure and connect to the backplane via an adapter to enable 6.0Gb/s for some of the internal drives?
In a 1:1 configuration, No (ports to disks). This type of configuration is a bit simpler, and cheaper (also faster for things like Online Expansion and Online Migration due to dedicated bandwidth per disk rather than sharing each port with multiples controlled by a SAS Expander).

So you've two primary options:

Option 1:
Get a card with more ports (that would put you at the ARC-1880ix12), and I generally recommend getting an additional 4x ports for future expansion (just add a 4 bay enclosure + disks). Which would put you into the http://www.superbiiz.com/detail.php?name=ARC1880I16. This reduces the need to replace every single disk once all bays are full in order to gain additional capacity.

Now if you notice, you get an additional 4x ports on the ARC-1880ix12 for just a couple of dollars more than the ARC-1880X (~ a massive $15 :p). Even when you add in the cost of the HDD adapter kit and the smaller enclosure (4x bay), it's still a bit cheaper.

In such a case, it's a bit more of a challenge to keep internal disks on the ICH as well, but it's doable (up to 2x max without the need for a SATA controller card, which can be had very inexpensively = under $30).

The ARC-1880ix16 will add costs now, but it's cheaper in the long run, which is why I recommend taking this route, as it's cheaper to add up to 4x disks vs. all disks at once in order to increase capacity (think of this like Intel's Tick Tock cycle, as you'll find yourself in an alternating pattern of this).

But 4x + 12x disks is cheaper for a "full cycle" than 2x all disks for the same period. Shouldn't be too hard to understand. ;)

Option 2:
The Areca 1880 series can actually control up to 128 disks, but requires SAS Expander based enclosures (example). Using one of these however, you'd be able to leverage that single SFF-8088 port on the back of the ARC-1880LP you linked, and it would work. The downsides are cost and bottlenecking (4x ports = shared with all external disks via the SAS Expander chip - it's a switch, and performs the same function as a Port Multiplier switch, only for SAS disks <also handles SATA disks, but a PM chip cannot handle SAS disks>).

It's actually possible to use separate SAS Expanders or even make your own SAS Expander enclosure (get a SAS Expander board meant for an enclosure, and install it yourself). That latter method can save quite a bit of money, but this takes skill, and could be disastrous if you get it wrong (there are different port counts to SAS Expanders as well, and you'd have to plan this out as well as power and cable routing). I've no idea of your technical capabilities, so this is up to you (I'm willing to guide you if you're game).

So you just connect any internal drives (basically just boot, scratch, and a backup clone?) to the ICH and use one SAS port for the primary storage enclosure, and leave the other free for possible future use?
On the boot, scratch, and clone disks, Yes. If you use an internal port card and have it connected to the HDD bays, you'd need to get a SATA controller for 2x additional ports (ICH contains 6x total; 2x are used for the optical bays, and 4x for the HDD bays). Assuming you don't want to remove your optical drive (and I don't blame you if you don't), then adding an inexpensive card will give you 2x ports = 3x total = exact number of ports needed for these particular drives.

Physically, you can locate them in the empty optical bay if they're 2.5" models. If you want at least one of them as a 3.5" model, there are ways of doing that as well, as an SSD can be mounted anywhere you can find room (Velcro or Zip Ties work brilliantly ;)).

OWC has HDD mounting kits for the ODD bay, so take a look.

In the case of the SAS port however, each one is only able to connect to 4x disks without the use of a SAS Expander. So the Sans Digital TR8X (or any other non-SAS Expander based 8 bay enclosure), has 2x SFF-8088 ports on the rear = need 2x ports from the card.

The ARC-1880X is the simplest way to go, but it will use all of it's ports for the Sans Digital enclosure (or similar), and it's full (can't add any more drives to it since it's not a SAS Expander based unit).

Hopefully this clears things up a bit.

I've also heard that if your SATA ports are 3.0Gb/s that it's best to use SATA 3 drives and not SATA 6 drives. Is that correct?
6.0Gb/s drives will step down to 3.0Gb/s when attached to a controller using that data rate.

Awesome, that Cyber Power unit looks great. Will one be enough for a Mac Pro and two storage enclosures?
It will depend on if everything is running full tilt, and how much time you want to have on battery.

Ideally, you'll need two.

However, the backup is less likely to be active, so one will get you started at least (you can always manually stop a backup process, and shut the system down until the power is restored). I certainly realize budget limitations, and this is something that can be lived with for a short period of time (if there are any issues to begin with; it all depends on what you expect of/how you use the UPS when the power is out in terms of run time when on the batteries).

Totally, which is why I really appreciate that you're willing to explain it so well. The funny part is that I have a pretty good understanding of how the technology works at a low level, but using it in the field is obviously completely different from reading about it in a book ;)
The differences are so stark, it's not funny. Understanding the basics is necessary, but it's just the beginning (i.e. understanding how a RAID 5 stores it's data tells you absolutely nothing about how the write hole is dealt with in hardware, and why software isn't suitable). And then there's the features and recovery options to deal with.

To top it off, we're still only dealing with one basic implementation, known as DAS (Direct Attached Storage)... There's NAS and SAN as well, and SAN in particular, adds a lot more complexity due to the fail-over in both system and networking (NAS adds networking to the mix, but not a lot in terms of fail-over, such as what I've described previously with SAN).

I went ahead and upgraded my connection to 5Mb/s up a while ago. It wasn't too much more and it should allow me to upload everything in about a month or so. I think the peace of mind will probably be worth the effort (and 5 bucks a month is about as cheap as you can get for unlimited backup).
Not bad, but that's about as fast as most can get, particularly if the location is zoned as residential (you may be in an area that has AT&T U-verse or FiOS, but it's expensive). T1/T3 or SONET is very hard to get, and insanely expensive (found in certain commercial zoning that's within the distance limitations).
 

Ok, awesome. That definitely clears up my questions regarding the different Areca models and the difference between SAS and SAS Expansion. If I had to choose now, I'd probably just go with the 1880x to keep things simple. My storage needs are unlikely to exceed the 10-12TB range of a 8 drive SAS enclosure in my Mac Pro's lifetime, so I think I will steer clear of SAS expansion for now :p

On a related note, if you had to guess, when do you think HDD prices will return to pre-natural disaster prices? I can probably limp along with my remaining system for a few months, and I'd prefer to wait until drive prices drop a bit. At the very least it'll give my online backup a chance to finish first :D
 
On a related note, if you had to guess, when do you think HDD prices will return to pre-natural disaster prices? I can probably limp along with my remaining system for a few months, and I'd prefer to wait until drive prices drop a bit. At the very least it'll give my online backup a chance to finish first :D
We're probably looking at the end of Q1 2012 from what I gather before supplies pick up and prices stabilize again (it seems most of the plants weren't actually flooded themselves, but there's no electrical power and the surrounding areas are unsafe).

But there's a lot there (suspension manufacturers, semiconductor manufacturing parts needed for HDD PCB's, motor manufacturers, and final assembly facilities by drive makers). Quite a large portion of what it takes to make drives has been affected in that area, and IIRC, most had the lion share of production there (60% or so from what I recall).

So if you can wait it out, I'd recommend doing so, as prices are probably going to continue to climb as component stocks are further depleted and output used to satisfy contract volumes (i.e. sent to system vendors rather than retail channels).
 
prices are probably going to continue to climb as component stocks are further depleted and output used to satisfy contract volumes (i.e. sent to system vendors rather than retail channels).

That and the fact HDD manufacturers have little reason to want prices back down to where they were before the floods in Thailand.
 
That and the fact HDD manufacturers have little reason to want prices back down to where they were before the floods in Thailand.
This is why I actually suspect that even after supplies have stabilized, prices will take time to fall due to greed supply manipulation. ;)
 
I really think it would make a difference, because honestly I/O is the only bottleneck these days, especially on a Mac Pro. Whenever a project is loaded in Aperture it needs to grab a ton of metadata, small bits in its database for image names, edits and versions, thumbnails, previews, etc. None or these files are even a MB in size but there can be thousands of them for a project. This is completely ignoring the actual master image files. To load the project from a library stored on a physical disk the drive head would need to move back and forth across a large portion of the disk to track down all the small files. This is exactly the scenario where HDDs suck compared to SSDs, so I think putting the library on an SSD would probably help a lot. Having scratch there for the working Projects master images seems like it would also help.

I pray for the day we see Terrabyte SSD's at affordable prices for this very reason. It's hard to go back once you have experienced the overall speed of a SSD system. That said, I still feel mechanical drivers are safer for storage.
 
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