I upgraded to Yosemite 10.10.3 today. The Continuity Tool 2.0 was showing everything was ok. However, in looking at "About Mac," I saw that Handoff was showing as not supported even though it was recognizing I had a BTLE card. I went through the uninstall / install process and everything is working as it should be.
For people using the Continuity tool, uninstall and then reinstall the tool after upgrading Yosemite.
For people using the Continuity tool, uninstall and then reinstall the tool after upgrading Yosemite.