I'm not suggesting getting a second GTX 680 in 6-12 months, I'm suggesting you spend that extra $500 on the next-generation card from AMD or NVIDIA once it gets released next year (e.g. the GTX 780 or whatever it will be called). You just stick with the single GTX 680 in the mean time.
If you have a great price on the dual-GPU card and have your heart set on it, then go for it -- nobody is telling you otherwise. It just requires a lot more effort than a single card solution, but you already know that.
Edit: Regarding power, the Mac Pro can provide 225W, 75W from the PCIe slot and 75W from each of the 6-pin power cables. If you find some kind of converter that takes the 2 6-pin cables from the motherboard and combines them into a single 8-pin connector, that should work and give the expected 150W. However, you still have the problem of feeding the card from two separate power sources, which has an unknown amount of risk.