Just take a spare drive and do a clean install of OSX on it. Don't wipe the drive you're using. At least this will test for driver or software related issues. I suspect what tsialex is saying regarding a dying card, but at least a fresh start will tell you 100% for sure.
Did you clean and reapply thermal paste on the GPU?
Yeah, i changed the thermal past.
Now I will install the operating system again on another disk and test the GPU from there.
I am currently using the original GPU and everything works fine, apparently my GTX 660 is dying