As the OP of this thread, it ha been quite some time since I reported an update so here it is.
First, to review, I had two serious problems with my iMac Pro (10-core): (1) Each time I woke the iMa pro from sleep, all of the external USB3 HD's were immediately ejected; (2) I could not boot into Windows 10 (installed with Bootcamp Assistant) without disconnecting the Pegasus3 R6 Thunderbolt Raid 5 array.
Apple did replace my iMac Pro and the new iMac Pro showed exactly the same two problems. I continued working with an Apple Senior Advisor and we were able to resolve one of the two problems. The latest Pegasus3 driver obtained from the Promise Technology web site installs a file in the Library>Extensions folder called PegasusR2ICON.kext. When this file is left in place, the USB3 HD's will eject very single time on waking from sleep. Removing this file and placing it in the trash completely solved this problem, and I have experienced no further ejection of any external HD's. The purpose of this file is unknown to me. It is NOT required for the Pegasus3 R6 raid system to function correctly. I have never been able to get Promise Technology support to tell me what the purpose of this file is.
Unfortunately, the second problem of being able to boot into Windows 10 is also completely the fault of the Promise Pegasus3 R6 raid system. Anytime the Pegasus3 is connected via Thunderbolt 3 to the iMac Pro, Windows 10 will hang at the boot screen. Disconnect the Pegasus3 R6 and the iMac Pro will boot into Windows 10 every time without any problems.
I have had a support ticket on file with Promise Technology since January 30, 2018, and to date they have not been able to solve either of these problems, although they apparently have been able to replicate them. My latest reply from Promise Technology Support is that they have prepared a new driver for the Pegasus3 R6 that "solves these problems", but it is in beta and not yet ready for release.
In summary, both of my issues with my iMac Pro were never the fault of the iMac Pro, but could be clearly linked to the Pegasus3 R6 that I purchased at the same time as the iMac Pro. The external drive ejection problem has been solved by removing the PegasusR2ICON.kext file. To date the only solution to the failure to boot into Widows 10 is to disconnect the Pegasus3 R6, boot into Windows 10, and then reconnect it. If one follows that procedure, then the Pegasus3 R6 works fine within Windows 10 and using Mac Drive 10 Pro, I can read and write to the Pegasus3 R6 I Windows 10 with no problem.
Considering the cost of the Pegasus3 R6 ($2700) and the fact that Promise Technology has not resolved these issues after three months, I would not recommend the combination of a Pegasus3 system and the iMac Pro.
Tom