I also think that it is PSU's problem. Only our MCH core 1 an 0, volts match probably because the variation is too small at ~1.25 volts.
Now, Sorry for the off topic:
I have just upgraded this mac pro to 10.10.4 and much of the slowness of 10.9 is gone. everything is snappier.
Perhaps the OS oriented issue with the 3,1 bus (regarding GPU speeds) being slower is solved?
Can you please recommend me any reliable GPU to upgrade the 5770? (no external PSU please) Lightroom (openGl GPU), Adobe cs apps, not gaming, 2 nec displays 1900*1200.
Thank you in advance,