Hmmm not sure what's going on but the warm boot issues are back BUT not all the time - weird....
I had hoped the SVT02B6Q firmware would have resolved the Ø on reboot issue on our new cMP 4,1>5,1, but after I had done the update last night it still has to be shut down completely before it will see the 870 EVO in bay 1.
Backstory- Our 3,1 had died several weeks ago (maybe PSU, maybe logic board, tests inconclusive) so we found a reasonably priced 5,1 (appears to be a 2010 4,1 flashed to 5,1). The 3,1 had been maxed out on El Capitan for years on a 850 EVO booting from an OWC PCIe card. I was looking forward to having a second x16 slot to get some more speed out of the SSD, but to be safe I cloned it to the 870 EVO via CCC in case things went pants. Booted fine on the card, so I got greedy and tried to update to the latest MacOS the cMP would take (Monterey) without taking the plunge into patches and open source firmware. Had to step up to High Sierra first and it failed saying the drive had no firmware partition. I had cloned over the Recovery partition so it took some google-fu to figure out why it would not install. Suggestion was do reinstall via Internet Recovery to have the partition created. That's when I found that when I did Command-R or Opt-Command-R the cMP would not make any network connections (both ethernet ports took self-assigned addresses, and the Airport said the WAP five feet away is too far away to connect to). Moved the 870 EVO to bay 1 and the cMP still would not make network connections in recovery modes but the High Sierra installer no longer complained about a missing firmware partition. This is when I encountered the Ø on reboot issue. some more fu and I found this forum among others saying had to shut down to see the 870. And that got me through the MacOS upgrading steps.
Now I'm going to move the SSD back to the OWC card and see if the Ø on reboot still happens.