I have done a similar project on my Model 1,1 (early 2008). from a 2- 2.66 Ghz. Intel Xeon 5150-Woodcrest, I upgraded to a 2- 3.00 Ghz. Intel Xeon 5160-Woodcrest. Eight years ago-as you know the processors were super-expensive. Then if I remember right I got a great deal for 2 - 5160 Woodcrest. I only paid $45/ each for a total of $90 for the 2. That processor swap then was a little more difficult than the model 5,1s which have the processor pull-out trays. But my Model 1,1 is working fast and beautifully---never, never experienced any errors in any of my legacy apps. They still work up to now. The only little hitch I got was: the "About this Mac" couldn't fully identify the 3.00 Ghz. Woodcrest. It only says: 2 X 3 Ghz. Unknown. Otherwise it works beautifully. I just got another MacPro model 5,1 (2010) with 2 - 2.4 Quad Core and like you I got 2- 6-core X5690 Westmere. What my concern is if I do the same swap that you did from 2- quad core to 2 - 6 core------Is there any firmware update that I have to do? Did you do a firmware update in yours? I'm not familiar with what I have to do for A "firmware update". Thanks.
X5690 has native support on the 5,1, no need to update the firmware.