Your MP already got 2x 6-core , so the issue is not caused by the OEM CPU.
These are the X5690 CPU's I suppose?
I've noticed that you got BootRom 140.0.0.0.0.
How did you succeed to install Mojave without the BootRom update to 144.0.0.0.0 ?
Anyway, since the issue is not caused by the CPU's, I don't know what it could be...
Apart from that , I recommend to read this thread about how to update the BootRom to 144 , there are a few advantages and perhaps it solves the issue.
These are the X5690 CPU's I suppose?
I've noticed that you got BootRom 140.0.0.0.0.
How did you succeed to install Mojave without the BootRom update to 144.0.0.0.0 ?
Anyway, since the issue is not caused by the CPU's, I don't know what it could be...
Apart from that , I recommend to read this thread about how to update the BootRom to 144 , there are a few advantages and perhaps it solves the issue.
MP5,1: What you have to do to upgrade to Mojave (BootROM upgrade instructions thread)
Please fully read this first post, you will probably find that you have one or more problems described into the various notes below. Mojave will only install if you have upgraded your BootROM to the current release and your Mac Pro have a Metal capable GPU*. If you are trying to install Mojave...
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